Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation:proton antiporter | D0A42_02860 | Not Available | Negative | 647855 - 649120 | 44846.6 |
| serine hydrolase | D0A42_02865 | Not Available | Negative | 649423 - 651012 | 57979.0 |
| rraa family protein | D0A42_02870 | Not Available | Negative | 651052 - 651552 | 17593.1 |
| duf72 domain-containing protein | D0A42_02875 | Not Available | Positive | 651743 - 652570 | 30289.9 |
| dmt family transporter | D0A42_02880 | Not Available | Positive | 653245 - 654192 | 33599.0 |
| pseudouridine synthase | D0A42_02885 | Not Available | Negative | 654562 - 655284 | 27027.8 |
| ggdef domain-containing protein | D0A42_02890 | Not Available | Negative | 655341 - 657707 | 86443.2 |
| atp-dependent rna helicase | D0A42_02895 | Not Available | Negative | 657883 - 659811 | 70294.5 |
| sigma-70 family rna polymerase sigma factor | D0A42_02900 | Not Available | Positive | 659984 - 660484 | 19057.8 |
| hypothetical protein | D0A42_02905 | Not Available | Positive | 660515 - 661162 | 24207.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

