Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdp-mannose pyrophosphatase nudk | D0A42_02485 | Not Available | Negative | 560346 - 560945 | 22116.5 |
| rhomboid family intramembrane serine protease | D0A42_02495 | Not Available | Negative | 562811 - 564028 | 45508.9 |
| transcription elongation factor greb | D0A42_02500 | Not Available | Positive | 564382 - 564888 | 18917.4 |
| 30s ribosomal protein s12 methylthiotransferase rimo | D0A42_02505 | Not Available | Negative | 565214 - 566587 | 50505.7 |
| hypothetical protein | D0A42_02510 | Not Available | Positive | 567211 - 568821 | 59014.0 |
| dienelactone hydrolase family protein | D0A42_02515 | Not Available | Positive | 569040 - 569702 | 23937.1 |
| hit family protein | D0A42_02520 | Not Available | Positive | 569699 - 570136 | 15782.9 |
| hypothetical protein | D0A42_02525 | Not Available | Positive | 570164 - 570331 | 5797.47 |
| hypothetical protein | D0A42_02530 | Not Available | Positive | 570674 - 570859 | 6996.81 |
| dctp deaminase | D0A42_02535 | Not Available | Negative | 570886 - 571455 | 21295.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

