Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-glycerate dehydrogenase | D0A42_02435 | Not Available | Negative | 549784 - 550842 | 36625.9 |
| chorismate synthase | D0A42_02440 | Not Available | Negative | 550835 - 551938 | 39140.4 |
| hypothetical protein | D0A42_02445 | Not Available | Negative | 551928 - 552371 | 15820.0 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | D0A42_02450 | Not Available | Negative | 552406 - 553332 | 33843.1 |
| sco family protein | D0A42_02455 | Not Available | Positive | 553413 - 554063 | 23535.3 |
| phosphatidylserine decarboxylase proenzyme | D0A42_02460 | Not Available | Positive | 554060 - 554908 | 30852.2 |
| hypothetical protein | D0A42_02465 | Not Available | Positive | 555191 - 556180 | 36463.5 |
| lysm peptidoglycan-binding domain-containing protein | D0A42_02470 | Not Available | Negative | 556271 - 557686 | 51003.7 |
| duf853 family protein | D0A42_02475 | Not Available | Positive | 558087 - 559592 | 53750.9 |
| hypothetical protein | D0A42_02480 | Not Available | Positive | 559618 - 560148 | 19032.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

