Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase carboxyl transferase subunit beta | D0A42_02385 | Not Available | Negative | 539156 - 540043 | 32015.7 |
| tryptophan synthase subunit alpha | D0A42_02390 | Not Available | Negative | 540245 - 541063 | 28397.9 |
| hypothetical protein | D0A42_02395 | Not Available | Negative | 541060 - 541644 | 20600.6 |
| tryptophan synthase subunit beta | D0A42_02400 | Not Available | Negative | 541575 - 542792 | 43066.2 |
| lysr family transcriptional regulator | D0A42_02405 | Not Available | Positive | 542904 - 543800 | 31862.2 |
| phosphoribosylanthranilate isomerase | D0A42_02410 | Not Available | Negative | 544051 - 544719 | 24162.9 |
| trna pseudouridine(38-40) synthase trua | D0A42_02415 | Not Available | Negative | 544716 - 545489 | 28388.9 |
| voc family protein | D0A42_02420 | Not Available | Negative | 545529 - 545909 | 13644.0 |
| ferrous iron transporter b | D0A42_02425 | Not Available | Negative | 545906 - 547963 | 71001.7 |
| aspartate-semialdehyde dehydrogenase | D0A42_02430 | Not Available | Negative | 548674 - 549699 | 36661.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

