Xanthomonas campestris pv. campestris strain WHRI8960

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas campestris pv. campestris strain WHRI8960 is a Gram-negative, rod-shaped bacterium that thrives in host-associated habitats, exhibiting optimal growth at a temperature of 25.0°C. This strain is an aerobic organism, requiring oxygen for metabolic processes. As a member of the Xanthomonadaceae family, X. campestris pv. campestris is known for its association with various plants, where it can play a significant role in plant health and disease dynamics. Its rod-shaped morphology and aerobic nature suggest a specialized adaptation to environments where oxygen is readily available, which aligns with its ecological niche. The specific growth temperature of 25.0°C indicates that this strain may be particularly suited for temperate climates, where many of its plant hosts are found. This temperature preference could influence its distribution and interactions within agricultural ecosystems, especially in regions where host plants are cultivated. Understanding the growth characteristics and habitat preferences of Xanthomonas campestris pv. campestris strain WHRI8960 can provide insights into its role in the plant microbiome, potentially influencing both microbial community structure and plant health outcomes. Its ecological adaptability underscores the importance of further studies on its interactions with host plants and the surrounding microorganisms in the environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas campestris
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Xanthomonas campestris pv. campestris strain WHRI8960
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas campestris pv. campestris strain WHRI8960

Accession NumberQUZS00000000.1

Gene Summary

Adenine Count

863808 bp

Thymine Count

855945 bp

Guanine Count

1607689 bp

Cytosine Count

1615702 bp

Genome Length

4943363 bp

Protein-coding Genes

4114 genes

Non-Coding Genes

182 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
conjugal transfer proteinD0A42_00010Not Available-762 - 141224009.4
23s ribosomal rnaNot AvailableNot Available+2146 - 5044Not Available
transmembrane repetitive proteinD0A42_00015Not Available-1541 - 318757620.4
fe-s biogenesis protein nfuaD0A42_00020Not Available-3303 - 390221157.1
4a-hydroxytetrahydrobiopterin dehydrataseD0A42_00025Not Available+3995 - 435113200.7
energy transducer tonbD0A42_00030Not Available+4348 - 477014616.6
zinc transporter zuptD0A42_00035Not Available+4898 - 571628652.2
5s ribosomal rnaNot AvailableNot Available+5163 - 5277Not Available
rlua family pseudouridine synthaseD0A42_00040Not Available-6101 - 708435933.5
Ncrna_class:otherNot AvailableNot Available+7144 - 7218Not Available

Displaying genes 51 – 60 of 4296 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites