Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| grx4 family monothiol glutaredoxin | D0A42_02185 | Not Available | Negative | 497824 - 498144 | 11903.5 |
| superoxide dismutase | D0A42_02190 | Not Available | Positive | 498266 - 498844 | 21591.5 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | D0A42_02195 | Not Available | Negative | 499078 - 500220 | 39962.8 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | D0A42_02200 | Not Available | Negative | 500217 - 500720 | 17145.7 |
| trm112 family protein | D0A42_02205 | Not Available | Positive | 500779 - 501048 | 9834.87 |
| carboxylating nicotinate-nucleotide diphosphorylase | D0A42_02210 | Not Available | Positive | 501057 - 501929 | 30300.5 |
| duf2272 domain-containing protein | D0A42_02215 | Not Available | Positive | 501971 - 503053 | 38293.4 |
| polyribonucleotide nucleotidyltransferase | D0A42_02220 | Not Available | Negative | 503774 - 505888 | 75645.2 |
| 30s ribosomal protein s15 | D0A42_02225 | Not Available | Negative | 506062 - 506322 | 10040.2 |
| trna pseudouridine(55) synthase trub | D0A42_02230 | Not Available | Negative | 506480 - 507406 | 32541.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

