Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trbi/virb10 family protein | D0A42_02085 | Not Available | Negative | 475130 - 476311 | 42141.9 |
| type iv secretion system protein virb9 | D0A42_02090 | Not Available | Negative | 476308 - 477075 | 29206.8 |
| conjugative transfer protein | D0A42_02095 | Not Available | Negative | 477072 - 478115 | 37265.2 |
| hypothetical protein | D0A42_02100 | Not Available | Negative | 478226 - 478636 | 14536.4 |
| type iv secretory system conjugative dna transfer family protein | D0A42_02105 | Not Available | Negative | 478965 - 480638 | 62153.7 |
| hypothetical protein | D0A42_02110 | Not Available | Negative | 480672 - 480914 | 8841.32 |
| Trna-val | Not Available | Not Available | Positive | 481316 - 481390 | Not Available |
| excinuclease abc subunit b | D0A42_02120 | Not Available | Negative | 481489 - 483510 | 75830.6 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | D0A42_02125 | Not Available | Positive | 483650 - 484201 | 19521.8 |
| Trna-asn | Not Available | Not Available | Positive | 484243 - 484319 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

