Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0A42_01630 | Not Available | Positive | 360056 - 360748 | 25406.2 |
| glycoside hydrolase family 127 protein | D0A42_01635 | Not Available | Negative | 360916 - 363291 | 87112.7 |
| Ncrna_class:other | Not Available | Not Available | Positive | 365592 - 365665 | Not Available |
| tonb-dependent receptor | D0A42_01640 | Not Available | Negative | 363442 - 366342 | 103493.0 |
| Ncrna_class:other | Not Available | Not Available | Positive | 367258 - 367332 | Not Available |
| avirulence protein | D0A42_01645 | Not Available | Negative | 366764 - 368251 | 54722.0 |
| s9 family peptidase | D0A42_01650 | Not Available | Negative | 368726 - 371068 | 86666.2 |
| glycosyl hydrolase family 43 | D0A42_01655 | Not Available | Negative | 371143 - 372654 | 55005.4 |
| carbohydrate-binding protein | D0A42_01660 | Not Available | Negative | 372738 - 377075 | 155872.0 |
| Ncrna_class:other | Not Available | Not Available | Positive | 378958 - 379032 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

