Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secf | D0A42_01535 | Not Available | Negative | 335985 - 336953 | 35362.6 |
| protein translocase subunit secd | D0A42_01540 | Not Available | Negative | 337045 - 338913 | 66643.2 |
| Ncrna_class:other | Not Available | Not Available | Positive | 338915 - 338989 | Not Available |
| preprotein translocase subunit yajc | D0A42_01545 | Not Available | Negative | 339221 - 339574 | 12438.5 |
| trna guanosine(34) transglycosylase tgt | D0A42_01550 | Not Available | Negative | 339707 - 340852 | 42140.4 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | D0A42_01555 | Not Available | Negative | 340938 - 342008 | 39297.2 |
| lrp/asnc family transcriptional regulator | D0A42_01560 | Not Available | Negative | 342313 - 342753 | 15932.4 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | D0A42_01565 | Not Available | Positive | 342865 - 344361 | 53607.9 |
| hypothetical protein | D0A42_01570 | Not Available | Negative | 344614 - 345321 | 26542.9 |
| metallophosphoesterase family protein | D0A42_01575 | Not Available | Negative | 345497 - 346882 | 50801.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

