Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0A42_21905 | Not Available | Negative | 4885432 - 4886223 | 28822.9 |
| is5 family transposase | D0A42_21920 | Not Available | Positive | 4886982 - 4887962 | 36738.4 |
| hypothetical protein | D0A42_21930 | Not Available | Negative | 4888620 - 4889651 | 35947.1 |
| hypothetical protein | D0A42_21940 | Not Available | Positive | 4892526 - 4892912 | 13613.7 |
| duf1311 domain-containing protein | D0A42_21945 | Not Available | Positive | 4893387 - 4894079 | 24836.0 |
| peptidoglycan-binding protein | D0A42_21950 | Not Available | Positive | 4894104 - 4896458 | 85323.1 |
| trypsin | D0A42_21955 | Not Available | Negative | 4896656 - 4897507 | 30233.5 |
| alpha/beta hydrolase | D0A42_21960 | Not Available | Negative | 4897782 - 4898891 | 39999.5 |
| hypothetical protein | D0A42_21965 | Not Available | Negative | 4899349 - 4900140 | 27458.0 |
| beta-glucosidase | D0A42_21970 | Not Available | Positive | 4900713 - 4901657 | 33894.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

