Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase | D0A42_21510 | Not Available | Positive | 4805851 - 4807581 | 61891.0 |
| duf962 domain-containing protein | D0A42_21520 | Not Available | Positive | 4808154 - 4808639 | 18233.5 |
| nad-dependent epimerase/dehydratase family protein | D0A42_21525 | Not Available | Negative | 4808687 - 4809622 | 33189.8 |
| monovalent cation/h+ antiporter subunit a | D0A42_21530 | Not Available | Positive | 4809754 - 4812582 | 101113.0 |
| na+/h+ antiporter subunit c | D0A42_21535 | Not Available | Positive | 4812582 - 4812956 | 13214.9 |
| monovalent cation/h+ antiporter subunit d | D0A42_21540 | Not Available | Positive | 4812953 - 4814512 | 55673.8 |
| na+/h+ antiporter subunit e | D0A42_21545 | Not Available | Positive | 4814509 - 4815015 | 18866.4 |
| k+/h+ antiporter subunit f | D0A42_21550 | Not Available | Positive | 4815012 - 4815296 | 10386.2 |
| na+/h+ antiporter subunit g | D0A42_21555 | Not Available | Positive | 4815293 - 4815715 | 15053.5 |
| lectin | D0A42_21560 | Not Available | Negative | 4815830 - 4816495 | 22913.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

