Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| qace family quaternary ammonium compound efflux smr transporter | D0A42_21410 | Not Available | Negative | 4787480 - 4787794 | 10844.6 |
| s-adenosylmethionine decarboxylase proenzyme | D0A42_21415 | Not Available | Negative | 4787958 - 4788752 | 30816.9 |
| crp-like protein clp | D0A42_21420 | Not Available | Positive | 4788890 - 4789582 | 25712.9 |
| haloacid dehalogenase | D0A42_21425 | Not Available | Negative | 4789922 - 4790638 | 26395.2 |
| indole-3-glycerol phosphate synthase trpc | D0A42_21430 | Not Available | Negative | 4790631 - 4791428 | 28698.6 |
| anthranilate phosphoribosyltransferase | D0A42_21435 | Not Available | Negative | 4791552 - 4792589 | 36472.1 |
| flavin reductase family protein | D0A42_21440 | Not Available | Negative | 4792714 - 4793346 | 22683.9 |
| aminodeoxychorismate/anthranilate synthase component ii | D0A42_21445 | Not Available | Negative | 4793470 - 4794048 | 21226.6 |
| duf541 domain-containing protein | D0A42_21450 | Not Available | Negative | 4794059 - 4794847 | 27835.5 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | D0A42_21455 | Not Available | Negative | 4794866 - 4795942 | 38476.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

