Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing protein | D0A42_21350 | Not Available | Negative | 4772098 - 4774179 | 75416.6 |
| hypothetical protein | D0A42_21360 | Not Available | Positive | 4774428 - 4775087 | 23936.1 |
| duf2974 domain-containing protein | D0A42_21365 | Not Available | Positive | 4775084 - 4776400 | 47057.8 |
| arabinogalactan endo-1,4-beta-galactosidase | D0A42_21370 | Not Available | Positive | 4776786 - 4777787 | 36908.7 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | D0A42_21375 | Not Available | Positive | 4778245 - 4780932 | 99647.6 |
| 4-hydroxyphenylpyruvate dioxygenase | D0A42_21380 | Not Available | Negative | 4781453 - 4782523 | 39970.3 |
| marr family transcriptional regulator | D0A42_21385 | Not Available | Positive | 4782691 - 4783179 | 18216.0 |
| thioredoxin family protein | D0A42_21390 | Not Available | Negative | 4783669 - 4784259 | 20790.6 |
| mfs transporter | D0A42_21395 | Not Available | Negative | 4784271 - 4785791 | 54333.8 |
| tryptophan 2,3-dioxygenase | D0A42_21400 | Not Available | Negative | 4786200 - 4787096 | 34619.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

