Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin-independent malonate decarboxylase subunit beta | D0A42_21295 | Not Available | Positive | 4762545 - 4763459 | 31970.2 |
| biotin-independent malonate decarboxylase subunit gamma | D0A42_21300 | Not Available | Positive | 4763456 - 4764160 | 24487.4 |
| malonate decarboxylase holo-[acyl-carrier-protein] synthase | D0A42_21305 | Not Available | Positive | 4764163 - 4764804 | 22757.4 |
| triphosphoribosyl-dephospho-coa synthase mdcb | D0A42_21310 | Not Available | Positive | 4765128 - 4765967 | 29218.3 |
| malonate decarboxylase subunit epsilon | D0A42_21315 | Not Available | Positive | 4766131 - 4767051 | 31393.8 |
| hypothetical protein | D0A42_21320 | Not Available | Positive | 4767141 - 4768496 | 46366.2 |
| gntr family transcriptional regulator | D0A42_21325 | Not Available | Positive | 4768576 - 4769295 | 26584.1 |
| had family hydrolase | D0A42_21335 | Not Available | Negative | 4770533 - 4771156 | 22292.9 |
| anti-sigma factor antagonist | D0A42_21340 | Not Available | Negative | 4771250 - 4771669 | 15313.4 |
| atp-binding protein | D0A42_21345 | Not Available | Negative | 4771666 - 4772097 | 15538.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

