Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0A42_21075 | Not Available | Negative | 4718226 - 4718483 | 9677.61 |
| uroporphyrinogen decarboxylase | D0A42_21085 | Not Available | Negative | 4718938 - 4720002 | 38591.3 |
| wgr domain-containing protein | D0A42_21090 | Not Available | Negative | 4720015 - 4720266 | 9488.28 |
| 3-dehydroquinate synthase | D0A42_21095 | Not Available | Negative | 4721178 - 4722290 | 38832.0 |
| shikimate kinase | D0A42_21100 | Not Available | Negative | 4722287 - 4722829 | 19760.9 |
| pyridoxamine 5'-phosphate oxidase | D0A42_21105 | Not Available | Positive | 4723024 - 4723623 | 22295.2 |
| duf2170 family protein | D0A42_21110 | Not Available | Positive | 4723754 - 4724227 | 17184.2 |
| pspa/im30 family protein | D0A42_21115 | Not Available | Positive | 4724240 - 4725013 | 27394.4 |
| potassium channel protein | D0A42_21120 | Not Available | Positive | 4725041 - 4726123 | 38249.5 |
| duf2491 family protein | D0A42_21125 | Not Available | Positive | 4726126 - 4726797 | 24604.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

