Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoadipyl-coa thiolase | D0A42_20725 | Not Available | Negative | 4638092 - 4639300 | 41705.0 |
| coa-transferase subunit beta | D0A42_20730 | Not Available | Negative | 4639297 - 4640085 | 27122.3 |
| coa transferase subunit a | D0A42_20735 | Not Available | Negative | 4640082 - 4640945 | 31018.9 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | D0A42_20740 | Not Available | Positive | 4641199 - 4642275 | 39952.3 |
| oxidoreductase | D0A42_20745 | Not Available | Positive | 4642423 - 4643406 | 35459.2 |
| deor family transcriptional regulator | D0A42_20750 | Not Available | Positive | 4643683 - 4644462 | 28222.0 |
| glycerol-3-phosphate dehydrogenase | D0A42_20755 | Not Available | Positive | 4644811 - 4646337 | 56466.2 |
| aquaporin family protein | D0A42_20760 | Not Available | Positive | 4646522 - 4647364 | 29986.8 |
| glycerol kinase | D0A42_20765 | Not Available | Positive | 4647415 - 4648914 | 55250.6 |
| hypothetical protein | D0A42_20770 | Not Available | Negative | 4648965 - 4649675 | 25991.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

