Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2490 domain-containing protein | D0A42_20675 | Not Available | Positive | 4628557 - 4629267 | 27622.7 |
| alpha/beta hydrolase | D0A42_20680 | Not Available | Negative | 4629351 - 4630319 | 34609.2 |
| serine protein kinase rio | D0A42_20685 | Not Available | Negative | 4630607 - 4631464 | 31600.6 |
| hth domain-containing protein | D0A42_20690 | Not Available | Positive | 4631616 - 4632476 | 30578.3 |
| alpha/beta hydrolase | D0A42_20695 | Not Available | Negative | 4632492 - 4633322 | 29481.9 |
| 4-carboxymuconolactone decarboxylase | D0A42_20700 | Not Available | Negative | 4633904 - 4634308 | 14720.5 |
| 3-oxoadipate enol-lactonase | D0A42_20705 | Not Available | Negative | 4634336 - 4635118 | 28617.1 |
| 3-carboxy-cis,cis-muconate cycloisomerase | D0A42_20710 | Not Available | Negative | 4635128 - 4636480 | 47267.0 |
| protocatechuate 3,4-dioxygenase subunit alpha | D0A42_20715 | Not Available | Negative | 4636714 - 4637277 | 20178.9 |
| protocatechuate 3,4-dioxygenase subunit beta | D0A42_20720 | Not Available | Negative | 4637282 - 4638019 | 27205.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

