Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0A42_20415 | Not Available | Negative | 4561840 - 4562172 | 12770.9 |
| 3-hydroxyisobutyrate dehydrogenase | D0A42_20420 | Not Available | Negative | 4562505 - 4563251 | 25868.9 |
| efflux rnd transporter permease subunit | D0A42_20425 | Not Available | Negative | 4563603 - 4566692 | 111423.0 |
| efflux rnd transporter periplasmic adaptor subunit | D0A42_20430 | Not Available | Negative | 4566689 - 4567804 | 38369.9 |
| tetr/acrr family transcriptional regulator | D0A42_20435 | Not Available | Negative | 4567880 - 4568503 | 23629.3 |
| efflux transporter outer membrane subunit | D0A42_20440 | Not Available | Positive | 4568588 - 4570060 | 50812.4 |
| hypothetical protein | D0A42_20445 | Not Available | Negative | 4570255 - 4570686 | 15524.3 |
| fad-binding protein | D0A42_20450 | Not Available | Negative | 4571009 - 4572445 | 51987.8 |
| hypothetical protein | D0A42_20455 | Not Available | Positive | 4572481 - 4572687 | 7140.47 |
| sdr family oxidoreductase | D0A42_20460 | Not Available | Positive | 4572748 - 4573506 | 26318.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

