Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s4 | D0A42_20150 | Not Available | Positive | 4501671 - 4502297 | 23282.1 |
| dna-directed rna polymerase subunit alpha | D0A42_20155 | Not Available | Positive | 4502351 - 4503349 | 36365.7 |
| 50s ribosomal protein l17 | D0A42_20160 | Not Available | Positive | 4503525 - 4503908 | 14333.6 |
| disulfide bond formation protein b | D0A42_20165 | Not Available | Positive | 4504496 - 4505014 | 18932.8 |
| 3-deoxy-7-phosphoheptulonate synthase class ii | D0A42_20170 | Not Available | Positive | 4505059 - 4506450 | 51833.6 |
| mechanosensitive ion channel family protein | D0A42_20180 | Not Available | Positive | 4506677 - 4507804 | 41314.7 |
| amidase | D0A42_20185 | Not Available | Negative | 4507985 - 4509613 | 56019.6 |
| duf2127 domain-containing protein | D0A42_20190 | Not Available | Negative | 4509704 - 4510174 | 16899.0 |
| translational gtpase typa | D0A42_20195 | Not Available | Negative | 4510193 - 4512022 | 67183.7 |
| peptidylprolyl isomerase | D0A42_20200 | Not Available | Positive | 4512267 - 4512761 | 17469.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

