Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidine kinase | D0A42_19995 | Not Available | Positive | 4482008 - 4482637 | 23341.1 |
| gaf domain-containing protein | D0A42_20000 | Not Available | Positive | 4482962 - 4484209 | 45522.6 |
| glucan biosynthesis protein d | D0A42_20005 | Not Available | Negative | 4484236 - 4485837 | 59837.0 |
| duf4380 domain-containing protein | D0A42_20010 | Not Available | Negative | 4485906 - 4487024 | 40283.4 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | D0A42_20020 | Not Available | Negative | 4487661 - 4488476 | 29785.0 |
| elongation factor tu | D0A42_20025 | Not Available | Positive | 4488847 - 4489229 | 13710.6 |
| 30s ribosomal protein s10 | D0A42_20030 | Not Available | Positive | 4489685 - 4489996 | 11687.2 |
| 50s ribosomal protein l3 | D0A42_20035 | Not Available | Positive | 4490008 - 4490658 | 22886.6 |
| 50s ribosomal protein l4 | D0A42_20040 | Not Available | Positive | 4490671 - 4491276 | 21806.4 |
| 50s ribosomal protein l23 | D0A42_20045 | Not Available | Positive | 4491273 - 4491572 | 11017.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

