Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | D0A42_19940 | Not Available | Positive | 4467088 - 4470120 | 110531.0 |
| tryptophan 7-halogenase | D0A42_19945 | Not Available | Positive | 4470231 - 4471751 | 56281.9 |
| orotidine-5'-phosphate decarboxylase | D0A42_19950 | Not Available | Negative | 4472369 - 4473100 | 25703.0 |
| 5'-nucleotidase, lipoprotein e(p4) family | D0A42_19955 | Not Available | Negative | 4473097 - 4474053 | 34482.5 |
| duf480 domain-containing protein | D0A42_19960 | Not Available | Positive | 4474418 - 4475086 | 24080.6 |
| duf4272 domain-containing protein | D0A42_19965 | Not Available | Negative | 4475351 - 4476406 | 38725.0 |
| n-acetyltransferase | D0A42_19970 | Not Available | Negative | 4476436 - 4476993 | 20614.7 |
| atp-dependent dna helicase rep | D0A42_19975 | Not Available | Negative | 4477349 - 4479325 | 73197.4 |
| res domain-containing protein | D0A42_19985 | Not Available | Negative | 4480046 - 4481146 | 41303.5 |
| hypothetical protein | D0A42_19990 | Not Available | Negative | 4481143 - 4481799 | 24122.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

