Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2256 domain-containing protein | D0A42_19820 | Not Available | Positive | 4434555 - 4434710 | 6198.52 |
| kelch repeat-containing protein | D0A42_19835 | Not Available | Positive | 4436103 - 4437161 | 37766.2 |
| smp-30/gluconolactonase/lre family protein | D0A42_19840 | Not Available | Negative | 4437291 - 4438328 | 36961.9 |
| hypothetical protein | D0A42_19845 | Not Available | Positive | 4439207 - 4440163 | 35559.6 |
| endo-1,4-beta-xylanase | D0A42_19850 | Not Available | Negative | 4440215 - 4441372 | 42182.3 |
| duf4982 domain-containing protein | D0A42_19855 | Not Available | Negative | 4441513 - 4444215 | 98846.9 |
| glucuronate isomerase | D0A42_19860 | Not Available | Negative | 4444491 - 4445906 | 52866.5 |
| endo-1,4-beta-xylanase | D0A42_19865 | Not Available | Negative | 4445958 - 4446950 | 36596.2 |
| mfs transporter | D0A42_19870 | Not Available | Negative | 4446960 - 4448465 | 53655.9 |
| tonb-dependent receptor | D0A42_19875 | Not Available | Positive | 4448809 - 4451691 | 103476.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

