Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c1 | D0A42_01230 | Not Available | Negative | 258241 - 258984 | 27382.9 |
| Ncrna_class:other | Not Available | Not Available | Positive | 260176 - 260250 | Not Available |
| cytochrome bc complex cytochrome b subunit | D0A42_01235 | Not Available | Negative | 258992 - 260251 | 47459.8 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | D0A42_01240 | Not Available | Negative | 260251 - 260895 | 23117.6 |
| lytic transglycosylase domain-containing protein | D0A42_01245 | Not Available | Negative | 261259 - 262227 | 33833.3 |
| wyl domain-containing protein | D0A42_01250 | Not Available | Negative | 262224 - 263243 | 36955.7 |
| glutathione s-transferase | D0A42_01255 | Not Available | Positive | 263328 - 263942 | 21949.3 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | D0A42_01260 | Not Available | Positive | 264009 - 265466 | 52740.9 |
| phoh family protein | D0A42_01265 | Not Available | Positive | 266132 - 267118 | 36038.2 |
| hypothetical protein | D0A42_01270 | Not Available | Positive | 267385 - 268257 | 31170.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

