Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylosidase | D0A42_18940 | Not Available | Positive | 4230102 - 4231682 | 58307.7 |
| laci family dna-binding transcriptional regulator | D0A42_18945 | Not Available | Positive | 4231814 - 4232881 | 38593.4 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | D0A42_18950 | Not Available | Positive | 4233771 - 4234625 | 31081.8 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | D0A42_18955 | Not Available | Positive | 4234701 - 4235456 | 26244.3 |
| hypothetical protein | D0A42_18960 | Not Available | Positive | 4235614 - 4236270 | 23285.7 |
| cupin domain-containing protein | D0A42_18965 | Not Available | Positive | 4236814 - 4237908 | 39478.9 |
| duf4375 domain-containing protein | D0A42_18970 | Not Available | Negative | 4238176 - 4238820 | 24158.8 |
| phenylalanine 4-monooxygenase | D0A42_18975 | Not Available | Negative | 4239253 - 4240143 | 33211.3 |
| lrp/asnc family transcriptional regulator | D0A42_18980 | Not Available | Positive | 4240271 - 4240753 | 17475.0 |
| tonb-dependent siderophore receptor | D0A42_18985 | Not Available | Positive | 4241014 - 4243230 | 81134.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

