Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pepsy domain-containing protein | D0A42_18890 | Not Available | Positive | 4218886 - 4220421 | 55072.3 |
| metallophosphoesterase | D0A42_18895 | Not Available | Positive | 4220555 - 4221058 | 17366.5 |
| aldo/keto reductase | D0A42_18900 | Not Available | Positive | 4221188 - 4222336 | 40967.6 |
| lysophospholipase | D0A42_18905 | Not Available | Negative | 4222541 - 4223455 | 31344.5 |
| carboxylesterase/lipase family protein | D0A42_18910 | Not Available | Negative | 4223517 - 4224995 | 53393.3 |
| alpha/beta hydrolase | D0A42_18915 | Not Available | Negative | 4225136 - 4226125 | 34850.5 |
| 2-keto-4-pentenoate hydratase | D0A42_18920 | Not Available | Positive | 4226332 - 4227153 | 28829.8 |
| trap transporter substrate-binding protein | D0A42_18925 | Not Available | Positive | 4227190 - 4228188 | 36927.2 |
| trap transporter small permease subunit | D0A42_18930 | Not Available | Positive | 4228307 - 4228720 | 15180.1 |
| trap transporter large permease | D0A42_18935 | Not Available | Positive | 4228720 - 4230003 | 44536.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

