Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0A42_18705 | Not Available | Negative | 4174053 - 4174358 | 11400.9 |
| 3-dehydroquinate dehydratase | D0A42_18710 | Not Available | Negative | 4174261 - 4174701 | 15524.8 |
| hypothetical protein | D0A42_18715 | Not Available | Negative | 4174721 - 4175143 | 14586.8 |
| translocation/assembly module tamb | D0A42_18720 | Not Available | Negative | 4175387 - 4179244 | 136391.0 |
| outer membrane protein assembly factor | D0A42_18725 | Not Available | Negative | 4179241 - 4181181 | 73086.8 |
| glycine--trna ligase subunit beta | D0A42_18730 | Not Available | Negative | 4181368 - 4183464 | 75053.0 |
| glycine--trna ligase subunit alpha | D0A42_18735 | Not Available | Negative | 4183760 - 4184668 | 34391.6 |
| type ii/iv secretion system protein | D0A42_18740 | Not Available | Positive | 4184760 - 4186571 | 66362.3 |
| glutamine amidotransferase | D0A42_18750 | Not Available | Positive | 4187136 - 4187900 | 27771.2 |
| hypothetical protein | D0A42_18755 | Not Available | Positive | 4187946 - 4188845 | 31822.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

