Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acylphosphatase | D0A42_18395 | Not Available | Positive | 4104211 - 4104477 | 9251.03 |
| hypothetical protein | D0A42_18400 | Not Available | Positive | 4104565 - 4105788 | 44598.3 |
| polyphosphate kinase 2 | D0A42_18405 | Not Available | Negative | 4105770 - 4106552 | 29913.8 |
| molybdenum cofactor biosynthesis protein b | D0A42_18410 | Not Available | Negative | 4106583 - 4107101 | 18645.3 |
| udp-n-acetylglucosamine-peptide n-acetylglucosaminyltransferase | D0A42_18415 | Not Available | Negative | 4107722 - 4109428 | 61388.5 |
| peptide chain release factor 1 | D0A42_18420 | Not Available | Negative | 4109425 - 4110510 | 40011.1 |
| glutamyl-trna reductase | D0A42_18425 | Not Available | Negative | 4110488 - 4111786 | 47367.4 |
| tetratricopeptide repeat protein | D0A42_18430 | Not Available | Positive | 4111852 - 4113540 | 61276.9 |
| outer membrane lipoprotein lolb | D0A42_18435 | Not Available | Positive | 4113537 - 4114193 | 23297.4 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | D0A42_18440 | Not Available | Positive | 4114175 - 4115062 | 31087.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

