Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase | D0A42_18275 | Not Available | Negative | 4080204 - 4080779 | 21031.4 |
| duf1631 domain-containing protein | D0A42_18280 | Not Available | Positive | 4080910 - 4083123 | 80499.5 |
| duf1631 domain-containing protein | D0A42_18285 | Not Available | Positive | 4083345 - 4085693 | 85627.3 |
| alpha/beta hydrolase | D0A42_18300 | Not Available | Negative | 4086036 - 4086899 | 31671.8 |
| tetr/acrr family transcriptional regulator | D0A42_18305 | Not Available | Positive | 4087041 - 4087700 | 23479.2 |
| duf3106 domain-containing protein | D0A42_18315 | Not Available | Negative | 4088629 - 4089108 | 18559.2 |
| hypothetical protein | D0A42_18320 | Not Available | Negative | 4089114 - 4089467 | 12646.0 |
| rna polymerase sigma factor | D0A42_18325 | Not Available | Negative | 4089464 - 4090129 | 24766.5 |
| hypothetical protein | D0A42_18330 | Not Available | Negative | 4090390 - 4090809 | 14501.2 |
| putative fe-s cluster assembly protein suft | D0A42_18335 | Not Available | Positive | 4090983 - 4091537 | 20213.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

