Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | D0A42_18125 | Not Available | Negative | 4052797 - 4053267 | 16755.3 |
| ef-hand domain-containing protein | D0A42_18130 | Not Available | Negative | 4053412 - 4053870 | 16231.2 |
| hypothetical protein | D0A42_18135 | Not Available | Negative | 4054038 - 4054790 | 27769.7 |
| smp-30/gluconolactonase/lre family protein | D0A42_18140 | Not Available | Negative | 4054842 - 4055795 | 33838.2 |
| gfo/idh/moca family oxidoreductase | D0A42_18145 | Not Available | Positive | 4055827 - 4056978 | 42257.7 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | D0A42_18150 | Not Available | Negative | 4057246 - 4058289 | 38914.2 |
| nucleoside deaminase | D0A42_18155 | Not Available | Negative | 4058311 - 4058871 | 20172.0 |
| hypothetical protein | D0A42_18160 | Not Available | Negative | 4058871 - 4059269 | 13538.2 |
| hypothetical protein | D0A42_18165 | Not Available | Negative | 4059342 - 4059710 | 12758.4 |
| dmt family transporter | D0A42_18170 | Not Available | Negative | 4059763 - 4060692 | 32352.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

