Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | D0A42_17865 | Not Available | Negative | 3999999 - 4002068 | 75825.2 |
| duf2946 domain-containing protein | D0A42_17870 | Not Available | Negative | 4002209 - 4002721 | 17800.9 |
| sensor histidine kinase | D0A42_17875 | Not Available | Positive | 4002694 - 4004022 | 48125.1 |
| hypothetical protein | D0A42_17880 | Not Available | Positive | 4003920 - 4004387 | 16777.2 |
| hypothetical protein | D0A42_17885 | Not Available | Negative | 4004528 - 4004809 | 10248.1 |
| lysr family transcriptional regulator | D0A42_17890 | Not Available | Negative | 4004904 - 4005884 | 35211.3 |
| uroporphyrinogen-iii c-methyltransferase | D0A42_17895 | Not Available | Positive | 4006048 - 4007253 | 41912.6 |
| cysteine synthase a | D0A42_17900 | Not Available | Positive | 4007270 - 4008229 | 34197.9 |
| isoprenylcysteine carboxylmethyltransferase family protein | D0A42_17905 | Not Available | Positive | 4008392 - 4008898 | 18663.2 |
| o-acetyl-adp-ribose deacetylase | D0A42_17910 | Not Available | Positive | 4009406 - 4009945 | 19815.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

