Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyhydroxyalkanoate synthesis repressor phar | D0A42_01090 | Not Available | Positive | 226104 - 226670 | 20876.7 |
| trab/gumn family protein | D0A42_01095 | Not Available | Negative | 226715 - 227680 | 35060.4 |
| duf1684 domain-containing protein | D0A42_01100 | Not Available | Negative | 227680 - 228579 | 32157.4 |
| dna mismatch repair endonuclease mutl | D0A42_01105 | Not Available | Negative | 228618 - 230492 | 67243.8 |
| n-acetylmuramoyl-l-alanine amidase | D0A42_01110 | Not Available | Negative | 230644 - 232335 | 57274.3 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | D0A42_01115 | Not Available | Negative | 232388 - 232888 | 17480.7 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | D0A42_01120 | Not Available | Negative | 232885 - 234372 | 50525.7 |
| trna epoxyqueuosine(34) reductase queg | D0A42_01125 | Not Available | Positive | 234397 - 235464 | 39824.4 |
| exodeoxyribonuclease vii large subunit | D0A42_01130 | Not Available | Positive | 235582 - 236922 | 49301.3 |
| virulence factor | D0A42_01135 | Not Available | Negative | 236971 - 238218 | 44366.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

