Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1631 domain-containing protein | D0A42_17345 | Not Available | Negative | 3869043 - 3871481 | 87067.2 |
| radical sam family heme chaperone hemw | D0A42_17350 | Not Available | Negative | 3871549 - 3872706 | 42751.6 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | D0A42_17355 | Not Available | Negative | 3872723 - 3873346 | 21687.1 |
| glyoxalase | D0A42_17360 | Not Available | Negative | 3873319 - 3873711 | 14490.1 |
| ribonuclease ph | D0A42_17365 | Not Available | Negative | 3873708 - 3874433 | 25981.0 |
| yicc family protein | D0A42_17370 | Not Available | Positive | 3874546 - 3875406 | 31641.2 |
| guanylate kinase | D0A42_17375 | Not Available | Positive | 3875518 - 3876129 | 22739.0 |
| dna-directed rna polymerase subunit omega | D0A42_17380 | Not Available | Positive | 3876374 - 3876673 | 11143.2 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | D0A42_17385 | Not Available | Positive | 3876817 - 3878988 | 80764.1 |
| lysr family transcriptional regulator | D0A42_17395 | Not Available | Negative | 3879180 - 3880049 | 31954.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

