Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein virb6 | D0A42_17130 | Not Available | Negative | 3822849 - 3823026 | 6838.48 |
| hypothetical protein | D0A42_17135 | Not Available | Negative | 3823115 - 3824461 | 48743.3 |
| hypothetical protein | D0A42_17140 | Not Available | Negative | 3824458 - 3825042 | 21831.4 |
| duf4189 domain-containing protein | D0A42_17145 | Not Available | Negative | 3825657 - 3825995 | 12237.6 |
| type iv secretion system protein virb6 | D0A42_17150 | Not Available | Negative | 3826274 - 3827395 | 39881.9 |
| hypothetical protein | D0A42_17155 | Not Available | Negative | 3827443 - 3827946 | 18391.2 |
| 6-phosphofructokinase | D0A42_17160 | Not Available | Negative | 3828785 - 3830041 | 44663.7 |
| adenylate kinase | D0A42_17165 | Not Available | Positive | 3830201 - 3830764 | 19882.0 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | D0A42_17170 | Not Available | Positive | 3831120 - 3832478 | 48455.1 |
| atp-dependent protease | D0A42_17175 | Not Available | Positive | 3832493 - 3833074 | 21296.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

