Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0A42_16910 | Not Available | Positive | 3767973 - 3768461 | 17426.2 |
| propionate catabolism operon regulatory protein prpr | D0A42_16915 | Not Available | Negative | 3768558 - 3770159 | 57487.0 |
| methylisocitrate lyase | D0A42_16920 | Not Available | Positive | 3770305 - 3771201 | 31790.0 |
| 2-methylcitrate synthase | D0A42_16925 | Not Available | Positive | 3771277 - 3772431 | 42326.5 |
| fe/s-dependent 2-methylisocitrate dehydratase acnd | D0A42_16930 | Not Available | Positive | 3772637 - 3775231 | 94050.2 |
| type ii toxin-antitoxin system pard family antitoxin | D0A42_16935 | Not Available | Positive | 3775267 - 3775560 | 10728.8 |
| type ii toxin-antitoxin system rele/pare family toxin | D0A42_16940 | Not Available | Positive | 3775557 - 3775874 | 11994.7 |
| 2-methylaconitate cis-trans isomerase prpf | D0A42_16945 | Not Available | Positive | 3775968 - 3777167 | 41246.4 |
| tonb-dependent receptor | D0A42_16950 | Not Available | Positive | 3777422 - 3779638 | 80132.0 |
| nucleoside hydrolase | D0A42_16955 | Not Available | Positive | 3779763 - 3780713 | 33748.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

