Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 3719381 - 3719457 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 3719489 - 3719565 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 3719649 - 3719724 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 3719802 - 3719886 | Not Available |
| trigger factor | D0A42_16625 | Not Available | Positive | 3720089 - 3721381 | 48316.5 |
| atp-dependent clp protease proteolytic subunit | D0A42_16630 | Not Available | Positive | 3721476 - 3722102 | 22797.5 |
| atp-dependent clp protease atp-binding subunit clpx | D0A42_16635 | Not Available | Positive | 3722227 - 3723513 | 47138.7 |
| endopeptidase la | D0A42_16640 | Not Available | Positive | 3723658 - 3726129 | 90643.7 |
| hu family dna-binding protein | D0A42_16645 | Not Available | Positive | 3726344 - 3726616 | 9328.17 |
| Trna-val | Not Available | Not Available | Positive | 3726628 - 3726702 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

