Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf937 domain-containing protein | D0A42_16400 | Not Available | Positive | 3672466 - 3673080 | 20246.1 |
| catalase/peroxidase hpi | D0A42_16405 | Not Available | Positive | 3673388 - 3675634 | 81597.4 |
| rna-binding s4 domain-containing protein | D0A42_16410 | Not Available | Negative | 3675967 - 3676374 | 14996.0 |
| mate family efflux transporter | D0A42_16415 | Not Available | Positive | 3676920 - 3678395 | 51672.4 |
| 50s ribosomal protein l19 | D0A42_16420 | Not Available | Negative | 3679498 - 3679905 | 14738.8 |
| trna (guanosine(37)-n1)-methyltransferase trmd | D0A42_16425 | Not Available | Negative | 3680050 - 3680808 | 27986.4 |
| ribosome maturation factor rimm | D0A42_16430 | Not Available | Negative | 3680873 - 3681385 | 19161.9 |
| 30s ribosomal protein s16 | D0A42_16435 | Not Available | Negative | 3681429 - 3681689 | 9633.59 |
| hypothetical protein | D0A42_16440 | Not Available | Negative | 3681798 - 3682595 | 28841.8 |
| nitronate monooxygenase | D0A42_16445 | Not Available | Negative | 3682586 - 3683680 | 37424.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

