Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escn/yscn/hrcn family type iii secretion system atpase | D0A42_16250 | Not Available | Negative | 3640817 - 3642145 | 47792.0 |
| hrpe/yscl family type iii secretion apparatus protein | D0A42_16255 | Not Available | Negative | 3642135 - 3642836 | 25112.6 |
| type iii secretion protein hrpb4 | D0A42_16260 | Not Available | Negative | 3642821 - 3643450 | 22926.0 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | D0A42_16265 | Not Available | Negative | 3643460 - 3644224 | 27473.0 |
| type iii secretion protein hrpb2 | D0A42_16270 | Not Available | Negative | 3644226 - 3644618 | 13797.8 |
| hrpb1 family type iii secretion system apparatus protein | D0A42_16275 | Not Available | Negative | 3644650 - 3645105 | 15931.1 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | D0A42_16280 | Not Available | Positive | 3645318 - 3646391 | 38591.2 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | D0A42_16285 | Not Available | Positive | 3646400 - 3648322 | 69063.0 |
| type iii secretion protein | D0A42_16290 | Not Available | Positive | 3648346 - 3648957 | 21974.1 |
| yscq/hrcq family type iii secretion apparatus protein | D0A42_16295 | Not Available | Positive | 3649090 - 3650004 | 31769.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

