Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0A42_16200 | Not Available | Positive | 3632633 - 3632731 | 3338.16 |
| hypothetical protein | D0A42_16205 | Not Available | Positive | 3632808 - 3633008 | 7122.59 |
| hypothetical protein | D0A42_16210 | Not Available | Positive | 3633111 - 3634763 | 60290.2 |
| hypothetical protein | D0A42_16215 | Not Available | Positive | 3635272 - 3635805 | 18807.2 |
| hypothetical protein | D0A42_16220 | Not Available | Positive | 3635802 - 3635963 | 5377.4 |
| lytic transglycosylase | D0A42_16225 | Not Available | Negative | 3636041 - 3636457 | 15463.6 |
| hypothetical protein | D0A42_16230 | Not Available | Positive | 3636991 - 3637356 | 12797.1 |
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | D0A42_16235 | Not Available | Negative | 3637494 - 3639311 | 64001.8 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | D0A42_16240 | Not Available | Negative | 3639488 - 3640318 | 28994.9 |
| type iii secretion protein hrpb7 | D0A42_16245 | Not Available | Negative | 3640315 - 3640824 | 18737.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

