Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit ii | D0A42_16040 | Not Available | Negative | 3586767 - 3587750 | 35161.3 |
| duf2244 domain-containing protein | D0A42_16045 | Not Available | Negative | 3587767 - 3588198 | 15930.5 |
| bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase puta | D0A42_16050 | Not Available | Positive | 3588522 - 3591722 | 114424.0 |
| is3 family transposase | D0A42_16055 | Not Available | Positive | 3592783 - 3593224 | 16764.9 |
| virulence factor | D0A42_16060 | Not Available | Positive | 3593686 - 3595014 | 49648.4 |
| hypothetical protein | D0A42_16065 | Not Available | Positive | 3595019 - 3595264 | 9068.85 |
| beta-galactosidase | D0A42_16070 | Not Available | Negative | 3595248 - 3597089 | 67968.4 |
| alpha-mannosidase | D0A42_16075 | Not Available | Negative | 3597307 - 3599652 | 85635.8 |
| glycoside hydrolase family 125 protein | D0A42_16080 | Not Available | Negative | 3599789 - 3601306 | 56402.8 |
| glycoside hydrolase family 3 protein | D0A42_16085 | Not Available | Negative | 3601394 - 3604060 | 95015.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

