Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pqq-dependent sugar dehydrogenase | D0A42_15940 | Not Available | Positive | 3566058 - 3567236 | 41820.7 |
| beta-glucosidase | D0A42_15945 | Not Available | Negative | 3567562 - 3569733 | 77567.3 |
| dihydroneopterin aldolase | D0A42_15950 | Not Available | Negative | 3569989 - 3570342 | 13331.1 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | D0A42_15955 | Not Available | Negative | 3570437 - 3571501 | 37130.6 |
| 30s ribosomal protein s21 | D0A42_15960 | Not Available | Positive | 3571782 - 3571997 | 8614.48 |
| gatb/yqey domain-containing protein | D0A42_15965 | Not Available | Positive | 3572221 - 3572667 | 15890.5 |
| yihy/virulence factor brkb family protein | D0A42_15970 | Not Available | Positive | 3573461 - 3574453 | 35768.1 |
| dna primase | D0A42_15975 | Not Available | Positive | 3574534 - 3576282 | 65310.1 |
| hypothetical protein | D0A42_15980 | Not Available | Positive | 3576279 - 3576779 | 17637.4 |
| bile acid:sodium symporter | D0A42_15985 | Not Available | Positive | 3576868 - 3577860 | 35248.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

