Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0A42_15780 | Not Available | Negative | 3533910 - 3534470 | 18087.7 |
| lysm peptidoglycan-binding domain-containing protein | D0A42_15785 | Not Available | Negative | 3534542 - 3534838 | 10593.2 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | D0A42_15790 | Not Available | Negative | 3534943 - 3535758 | 29664.2 |
| amidohydrolase | D0A42_15795 | Not Available | Negative | 3535933 - 3537237 | 45985.4 |
| efflux rnd transporter periplasmic adaptor subunit | D0A42_15800 | Not Available | Positive | 3537497 - 3538735 | 43580.9 |
| acriflavine resistance protein b | D0A42_15805 | Not Available | Positive | 3538772 - 3542077 | 117708.0 |
| acrb/acrd/acrf family protein | D0A42_15810 | Not Available | Positive | 3542205 - 3545345 | 111456.0 |
| ycii family protein | D0A42_15825 | Not Available | Positive | 3545629 - 3546096 | 16667.0 |
| voc family protein | D0A42_15830 | Not Available | Positive | 3546120 - 3546944 | 29405.3 |
| rna polymerase sigma factor | D0A42_15835 | Not Available | Positive | 3547008 - 3548279 | 45801.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

