Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase family protein | D0A42_15580 | Not Available | Negative | 3486795 - 3488084 | 45786.7 |
| glycosyltransferase family 39 protein | D0A42_15585 | Not Available | Negative | 3488224 - 3489945 | 64078.6 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | D0A42_15590 | Not Available | Negative | 3489967 - 3491280 | 47176.6 |
| methionyl-trna formyltransferase | D0A42_15595 | Not Available | Negative | 3491277 - 3492200 | 32646.7 |
| peptide deformylase | D0A42_15600 | Not Available | Negative | 3492596 - 3493108 | 19048.1 |
| lysm peptidoglycan-binding domain-containing protein | D0A42_15605 | Not Available | Positive | 3493240 - 3494376 | 41357.1 |
| dna-protecting protein dpra | D0A42_15610 | Not Available | Positive | 3494449 - 3495585 | 39887.0 |
| duf494 domain-containing protein | D0A42_15615 | Not Available | Positive | 3495629 - 3496102 | 18114.5 |
| duf4339 domain-containing protein | D0A42_15620 | Not Available | Positive | 3496143 - 3496883 | 25920.7 |
| duf4339 domain-containing protein | D0A42_15625 | Not Available | Positive | 3496910 - 3498055 | 39930.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

