Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna replication/repair protein recf | D0A42_14990 | Not Available | Negative | 3348441 - 3349547 | 40822.6 |
| dna polymerase iii subunit beta | D0A42_14995 | Not Available | Negative | 3350434 - 3351534 | 40746.9 |
| chromosomal replication initiator protein dnaa | D0A42_15000 | Not Available | Negative | 3351810 - 3353138 | 49519.5 |
| hypothetical protein | D0A42_15005 | Not Available | Positive | 3353076 - 3353339 | 9860.92 |
| 50s ribosomal protein l34 | D0A42_15010 | Not Available | Positive | 3353381 - 3353521 | 5310.58 |
| ribonuclease p protein component | D0A42_15015 | Not Available | Positive | 3353560 - 3354006 | 16326.8 |
| membrane protein insertase yidc | D0A42_15020 | Not Available | Positive | 3354022 - 3355743 | 63347.9 |
| tetratricopeptide repeat protein | D0A42_15025 | Not Available | Positive | 3355833 - 3358538 | 97866.8 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | D0A42_15030 | Not Available | Positive | 3358561 - 3359901 | 47502.5 |
| oar protein | D0A42_15035 | Not Available | Negative | 3359993 - 3363037 | 111066.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

