Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy transducer tonb | D0A42_14365 | Not Available | Negative | 3204287 - 3204754 | 16201.2 |
| hypothetical protein | D0A42_14370 | Not Available | Positive | 3204884 - 3205153 | 9474.54 |
| type iii secretion system effector protein | D0A42_14375 | Not Available | Negative | 3205287 - 3206666 | 49564.2 |
| hypothetical protein | D0A42_14380 | Not Available | Positive | 3207105 - 3207854 | 25781.4 |
| tetr/acrr family transcriptional regulator | D0A42_14385 | Not Available | Negative | 3207919 - 3208548 | 23678.1 |
| histidine phosphatase family protein | D0A42_14390 | Not Available | Positive | 3208765 - 3209544 | 28179.4 |
| adp-dependent (s)-nad(p)h-hydrate dehydratase | D0A42_14395 | Not Available | Positive | 3209546 - 3210415 | 28803.3 |
| glycosyl hydrolase | D0A42_14400 | Not Available | Positive | 3211015 - 3212334 | 48486.3 |
| glycoside hydrolase family 15 protein | D0A42_14405 | Not Available | Negative | 3212392 - 3214197 | 67218.5 |
| sdr family oxidoreductase | D0A42_14410 | Not Available | Negative | 3214194 - 3215096 | 32054.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

