Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0A42_13500 | Not Available | Positive | 2999625 - 2999969 | 12378.6 |
| dmt family transporter | D0A42_13505 | Not Available | Negative | 3000100 - 3001023 | 33465.9 |
| phzf family phenazine biosynthesis protein | D0A42_13510 | Not Available | Negative | 3001020 - 3001811 | 28208.1 |
| plp-dependent aminotransferase family protein | D0A42_13515 | Not Available | Positive | 3001934 - 3003343 | 50600.0 |
| s-formylglutathione hydrolase | D0A42_13525 | Not Available | Negative | 3003739 - 3004569 | 30052.3 |
| glutathione-dependent formaldehyde-activating enzyme | D0A42_13530 | Not Available | Negative | 3004629 - 3005204 | 20207.0 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | D0A42_13535 | Not Available | Negative | 3005271 - 3006380 | 39030.2 |
| metal/formaldehyde-sensitive transcriptional repressor | D0A42_13540 | Not Available | Negative | 3006444 - 3006719 | 10013.2 |
| lysr family transcriptional regulator | D0A42_13545 | Not Available | Negative | 3006927 - 3007841 | 33035.1 |
| c4-dicarboxylate abc transporter | D0A42_13550 | Not Available | Positive | 3007937 - 3009118 | 41702.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

