Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase small subunit | D0A42_13245 | Not Available | Negative | 2934384 - 2935031 | 24228.6 |
| 3-isopropylmalate dehydratase large subunit | D0A42_13250 | Not Available | Negative | 2935096 - 2936535 | 51469.4 |
| lysr family transcriptional regulator | D0A42_13255 | Not Available | Positive | 2936660 - 2937562 | 32187.3 |
| ggdef domain-containing protein | D0A42_13260 | Not Available | Negative | 2937582 - 2940587 | 109295.0 |
| tetr/acrr family transcriptional regulator | D0A42_13265 | Not Available | Positive | 2940794 - 2941447 | 23527.3 |
| protein-l-isoaspartate o-methyltransferase | D0A42_13270 | Not Available | Positive | 2941576 - 2942232 | 24080.0 |
| hypothetical protein | D0A42_13275 | Not Available | Positive | 2942253 - 2943626 | 49361.9 |
| 3-deoxy-d-manno-octulosonic acid transferase | D0A42_13280 | Not Available | Negative | 2944038 - 2945357 | 48773.0 |
| lpxl/lpxp family kdo(2)-lipid iv(a) lauroyl/palmitoleoyl acyltransferase | D0A42_13285 | Not Available | Positive | 2945788 - 2946708 | 35089.8 |
| o-antigen ligase family protein | D0A42_13290 | Not Available | Negative | 2946987 - 2948321 | 46983.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

