Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate synthase a | D0A42_11925 | Not Available | Positive | 2638423 - 2640045 | 59295.5 |
| isocitrate lyase | D0A42_11930 | Not Available | Positive | 2640221 - 2641516 | 46749.2 |
| ggdef domain-containing protein | D0A42_11935 | Not Available | Positive | 2641706 - 2642749 | 37828.9 |
| putative peptide modification system cyclase | D0A42_11940 | Not Available | Positive | 2642753 - 2645413 | 97424.6 |
| putative modified peptide | D0A42_11945 | Not Available | Negative | 2645353 - 2645742 | 13999.5 |
| putative peptide maturation dehydrogenase | D0A42_11950 | Not Available | Positive | 2645778 - 2646974 | 44059.8 |
| s9 family peptidase | D0A42_11955 | Not Available | Negative | 2647177 - 2649270 | 75176.3 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | D0A42_11960 | Not Available | Negative | 2649373 - 2651415 | 72630.3 |
| methylcrotonoyl-coa carboxylase | D0A42_11965 | Not Available | Negative | 2651665 - 2653275 | 57251.9 |
| isovaleryl-coa dehydrogenase | D0A42_11970 | Not Available | Negative | 2653286 - 2654449 | 41503.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

