Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide synthase | D0A42_11825 | Not Available | Positive | 2617456 - 2619108 | 58639.7 |
| nad-dependent epimerase/dehydratase family protein | D0A42_11830 | Not Available | Positive | 2619202 - 2620215 | 36254.5 |
| duf1328 domain-containing protein | D0A42_11835 | Not Available | Positive | 2620280 - 2620438 | 5640.36 |
| gnat family n-acetyltransferase | D0A42_11840 | Not Available | Negative | 2620541 - 2621023 | 17648.2 |
| d-alanine--d-alanine ligase | D0A42_11845 | Not Available | Negative | 2621020 - 2622126 | 39668.6 |
| scp2 domain-containing protein | D0A42_11850 | Not Available | Positive | 2622299 - 2622943 | 22919.4 |
| ubiquinone biosynthesis regulatory protein kinase ubib | D0A42_11855 | Not Available | Positive | 2622940 - 2624613 | 62773.3 |
| pseudouridylate synthase | D0A42_11860 | Not Available | Positive | 2624746 - 2625483 | 27189.9 |
| duf2059 domain-containing protein | D0A42_11865 | Not Available | Negative | 2626309 - 2626851 | 20081.4 |
| aminoacyl-trna hydrolase | D0A42_11870 | Not Available | Positive | 2626946 - 2627377 | 16028.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

