Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | D0A42_11770 | Not Available | Positive | 2607150 - 2607479 | 10850.6 |
| trna (cytidine(34)-2'-o)-methyltransferase | D0A42_11775 | Not Available | Negative | 2607489 - 2607965 | 17673.3 |
| hypothetical protein | D0A42_11780 | Not Available | Negative | 2608020 - 2608478 | 15451.7 |
| duf4156 domain-containing protein | D0A42_11785 | Not Available | Positive | 2608865 - 2609185 | 11326.7 |
| 3-oxoacyl-acp synthase iii | D0A42_11790 | Not Available | Positive | 2609287 - 2610303 | 36617.3 |
| fic family protein | D0A42_11795 | Not Available | Positive | 2610376 - 2611539 | 43924.0 |
| site-specific dna-methyltransferase | D0A42_11800 | Not Available | Positive | 2611536 - 2613167 | 61870.2 |
| helicase snf2 | D0A42_11805 | Not Available | Positive | 2613169 - 2615670 | 91569.6 |
| alpha/beta fold hydrolase | D0A42_11810 | Not Available | Positive | 2615667 - 2616569 | 34186.1 |
| ykgj family cysteine cluster protein | D0A42_11815 | Not Available | Negative | 2616713 - 2617096 | 13876.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

