Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoyl(octanoyl) transferase lipb | D0A42_11510 | Not Available | Positive | 2553349 - 2554047 | 25275.6 |
| lipoyl synthase | D0A42_11515 | Not Available | Positive | 2554062 - 2555075 | 36886.1 |
| pdz domain-containing protein | D0A42_11520 | Not Available | Positive | 2555299 - 2557482 | 80050.5 |
| sulfite exporter taue/safe family protein | D0A42_11525 | Not Available | Negative | 2557588 - 2558331 | 25946.9 |
| lysr family transcriptional regulator | D0A42_11530 | Not Available | Positive | 2558420 - 2559325 | 32401.3 |
| endonuclease | D0A42_11535 | Not Available | Negative | 2559406 - 2560272 | 32570.8 |
| bifunctional nicotinamide-nucleotide adenylyltransferase/nudix hydroxylase | D0A42_11540 | Not Available | Positive | 2560454 - 2561509 | 39328.2 |
| nicotinate phosphoribosyltransferase | D0A42_11545 | Not Available | Positive | 2561569 - 2562975 | 51605.1 |
| hypothetical protein | D0A42_11550 | Not Available | Positive | 2562884 - 2564098 | 44570.2 |
| sam-dependent methyltransferase | D0A42_11555 | Not Available | Positive | 2564091 - 2565155 | 38942.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

